| CoRE-ATAC: A deep learning model for the functional classification of regulatory elements from single cell and bulk ATAC-seq data. | 0 | 0.34 | 2021 |
| V-SVA: an R Shiny application for detecting and annotating hidden sources of variation in single cell RNA-seq data. | 0 | 0.34 | 2020 |
| QuIN: A Web Server for Querying and Visualizing Chromatin Interaction Networks. | 1 | 0.34 | 2016 |
| Discover regulatory DNA elements using chromatin signatures and artificial neural network | 20 | 1.29 | 2010 |
| Markov clustering of protein interaction networks with improved balance and scalability | 29 | 1.16 | 2010 |
| Mutual Information Based Extrinsic Similarity for Microarray Analysis | 2 | 0.39 | 2009 |
| Predicting functionality of protein-DNA interactions by integrating diverse evidence. | 12 | 0.99 | 2009 |
| An event-based framework for characterizing the evolutionary behavior of interaction graphs | 157 | 7.78 | 2007 |
| An ensemble framework for clustering protein-protein interaction networks. | 73 | 3.61 | 2007 |
| A spatio-temporal mining approach towards summarizing and analyzing protein folding trajectories. | 5 | 0.53 | 2007 |
| Construction of a reference gene association network from multiple profiling data: application to data analysis. | 10 | 0.79 | 2007 |
| Improving functional modularity in protein-protein interactions graphs using hub-induced subgraphs | 25 | 1.18 | 2006 |
| Effective Pre-Processing Strategies for Functional Clustering of a Protein-Protein Interactions Network | 13 | 0.94 | 2005 |
