| Modeling microbial cross-feeding at intermediate scale portrays community dynamics and species coexistence | 0 | 0.34 | 2020 |
| Transforming the Language of Life: Transformer Neural Networks for Protein Prediction Tasks | 1 | 0.35 | 2020 |
| Predicting tumor cell line response to drug pairs with deep learning. | 6 | 0.45 | 2018 |
| Microbial community structure predicted by the stable marriage problem. | 0 | 0.34 | 2017 |
| DREISS: Using State-Space Models to Infer the Dynamics of Gene Expression Driven by External and Internal Regulatory Networks. | 0 | 0.34 | 2016 |
| Diversity waves in collapse-driven population dynamics | 0 | 0.34 | 2015 |
| Evolutionary Capacitance and Control of Protein Stability in Protein-Protein Interaction Networks. | 1 | 0.36 | 2013 |
| Comparative network analysis of gene co-expression networks reveals the conserved and species-specific functions of cell-wall related genes between Arabidopsis and Poplar | 0 | 0.34 | 2013 |
| A Toolbox Model of Evolution of Metabolic Pathways on Networks of Arbitrary Topology | 0 | 0.34 | 2011 |
| Detection of the dominant direction of information flow and feedback links in densely interconnected regulatory networks. | 35 | 0.60 | 2008 |
| Uv-Induced Mutagenesis In Escherichia Coli Sos Response: A Quantitative Model | 5 | 0.59 | 2007 |
| Ranking Scientific Publications Using a Simple Model of Network Traffic | 45 | 2.15 | 2006 |
| Automatic pathway building in biological association networks. | 40 | 1.17 | 2006 |
