| GRAFIMO: Variant and haplotype aware motif scanning on pangenome graphs | 0 | 0.34 | 2021 |
| CRISPRitz: rapid, high-throughput, and variant-aware in silico off-target site identification for CRISPR genome editing. | 0 | 0.34 | 2020 |
| Robust and Scalable Learning of Complex Intrinsic Dataset Geometry via ElPiGraph. | 0 | 0.34 | 2020 |
| 12 Grand Challenges in Single-Cell Data Science. | 0 | 0.34 | 2019 |
| DrugThatGene: integrative analysis to streamline the identification of druggable genes, pathways, and protein complexes from CRISPR screens. | 0 | 0.34 | 2019 |
| Robust and scalable learning of data manifolds with complex topologies via ElPiGraph. | 1 | 0.36 | 2018 |
| Haystack: systematic analysis of the variation of epigenetic states and cell-type specific regulatory elements. | 0 | 0.34 | 2018 |
| AmpUMI: design and analysis of unique molecular identifiers for deep amplicon sequencing. | 0 | 0.34 | 2018 |
| Applications of alignment-free methods in epigenomics. | 9 | 0.54 | 2014 |
| A methodology to assess the intrinsic discriminative ability of a distance function and its interplay with clustering algorithms for microarray data analysis. | 8 | 0.39 | 2013 |
| Multi Layer Analysis | 0 | 0.34 | 2011 |
| A new dissimilarity measure for clustering seismic signals | 0 | 0.34 | 2011 |
| A motif-independent metric for DNA sequence specificity. | 3 | 0.41 | 2011 |
| Distance functions, clustering algorithms and microarray data analysis | 15 | 0.68 | 2010 |
| A Fuzzy One Class Classifier for Multi Layer Model | 2 | 0.38 | 2009 |
| A one class KNN for signal identification: a biological case study | 2 | 0.38 | 2009 |
| A One Class Classifier for Signal Identification: A Biological Case Study | 4 | 0.49 | 2008 |
| Interval Length Analysis in Multi Layer Model | 0 | 0.34 | 2008 |
| A new multi-layers method to analyze gene expression | 5 | 0.70 | 2007 |
