| Modelling Dynamic Data Structures with the B Method. | 0 | 0.34 | 2018 |
| Playing hide and seek with repeats in local and global de novo transcriptome assembly of short RNA-seq reads. | 1 | 0.37 | 2017 |
| A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs | 1 | 0.36 | 2015 |
| Telling metabolic stories to explore metabolomics data: a case study on the yeast response to cadmium exposure. | 3 | 0.39 | 2014 |
| Navigating in a Sea of Repeats in RNA-seq without Drowning. | 0 | 0.34 | 2014 |
| Chitars: A Database Of Human, Mouse And Fruit Fly Chimeric Transcripts And Rna-Sequencing Data | 5 | 0.50 | 2013 |
| A polynomial delay algorithm for the enumeration of bubbles with length constraints in directed graphs and its application to the detection of alternative splicing in RNA-seq data. | 6 | 0.53 | 2013 |
| Telling Stories Fast. | 1 | 0.37 | 2013 |
| Efficient bubble enumeration in directed graphs | 8 | 0.60 | 2012 |
| Telling stories: Enumerating maximal directed acyclic graphs with a constrained set of sources and targets | 3 | 0.39 | 2012 |
| KISSPLICE: de-novo calling alternative splicing events from RNA-seq data. | 32 | 1.68 | 2012 |
| Enumerating chemical organisations in consistent metabolic networks: complexity and algorithms | 1 | 0.37 | 2010 |
| Identifying SNPs without a reference genome by comparing raw reads | 12 | 0.98 | 2010 |
| Assessing the exceptionality of coloured motifs in networks. | 11 | 0.63 | 2009 |
| Modes and cuts in metabolic networks: complexity and algorithms. | 34 | 2.04 | 2009 |
| Exact Transcriptome Reconstruction from Short Sequence Reads | 18 | 3.32 | 2008 |
| An Introduction to Metabolic Networks and Their Structural Analysis | 55 | 2.59 | 2008 |
| Metabolic network visualization eliminating node redundance and preserving metabolic pathways. | 29 | 0.93 | 2007 |
| Motif search in graphs: application to metabolic networks. | 69 | 2.77 | 2006 |
| Metabolic network visualization using constraint planar graph drawing algorithm | 5 | 0.51 | 2006 |
| Reaction motifs in metabolic networks | 7 | 0.69 | 2005 |
| Referees | 0 | 0.34 | 2000 |
