| MICA: A fast short-read aligner that takes full advantage of Intel Many Integrated Core Architecture (MIC). | 0 | 0.34 | 2014 |
| Juxtapp: a scalable system for detecting code reuse among android applications | 85 | 2.65 | 2012 |
| SOAP3: ultra-fast GPU-based parallel alignment tool for short reads. | 75 | 3.10 | 2012 |
| Succinct Text Indexing with Wildcards | 16 | 0.68 | 2009 |
| High Throughput Short Read Alignment via Bi-directional BWT | 44 | 2.03 | 2009 |
