Title
Periodic String Comparison
Abstract
In our previous work, we introduced the concept of semilocal string comparison, and developed for it an efficient method called the seaweed algorithm. In the current paper, we introduce its extension, called the periodic seaweed algorithm. The new algorithm allows efficient exploitation of the periodic structure in one of the input strings. By application of the periodic seaweed algorithm, we obtain new algorithms for the tandem LCS problem and the tandem cyclic alignment problem, improving on existing algorithms in running time.
Year
DOI
Venue
2009
10.1007/978-3-642-02441-2_18
Combinatorial Pattern Matching
Keywords
Field
DocType
periodic string comparison,current paper,efficient exploitation,seaweed algorithm,tandem cyclic alignment problem,tandem lcs problem,input string,efficient method,new algorithm,periodic structure,periodic seaweed algorithm
Discrete mathematics,Tandem,Computer science,Algorithm,Periodic graph (geometry)
Conference
Volume
ISSN
Citations 
5577
0302-9743
4
PageRank 
References 
Authors
0.39
13
2
Name
Order
Citations
PageRank
Alexander Tiskin122015.50
Coventry CV2222.87