Title
Compact data structure and scalable algorithms for the sparse grid technique
Abstract
The sparse grid discretization technique enables a compressed representation of higher-dimensional functions. In its original form, it relies heavily on recursion and complex data structures, thus being far from well-suited for GPUs. In this paper, we describe optimizations that enable us to implement compression and decompression, the crucial sparse grid algorithms for our application, on Nvidia GPUs. The main idea consists of a bijective mapping between the set of points in a multi-dimensional sparse grid and a set of consecutive natural numbers. The resulting data structure consumes a minimum amount of memory. For a 10-dimensional sparse grid with approximately 127 million points, it consumes up to 30 times less memory than trees or hash tables which are typically used. Compared to a sequential CPU implementation, the speedups achieved on GPU are up to 17 for compression and up to 70 for decompression, respectively. We show that the optimizations are also applicable to multicore CPUs.
Year
DOI
Venue
2011
10.1145/1941553.1941559
PPOPP
Keywords
Field
DocType
data structure,hash table,sparse grids,complex data
Discretization,Data structure,Computer science,CUDA,Sparse approximation,Parallel computing,Theoretical computer science,Computational science,Sparse grid,Multi-core processor,Recursion,Hash table
Conference
Volume
Issue
ISSN
46
8
0362-1340
Citations 
PageRank 
References 
3
0.53
11
Authors
5
Name
Order
Citations
PageRank
Alin Florindor Murarasu1192.50
Josef Weidendorfer211517.98
Gerrit Buse3182.53
Daniel Butnaru4413.52
Dirk Pflüger514621.52