Title | ||
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Finite state abstraction of a stochastic model of the lactose regulation system of Escherichia coli |
Abstract | ||
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This paper focuses on the lactose regulation system in Escherichia coli bacteria, one of the most extensively studied examples of positive feedback in a naturally occurring gene network. State-of-the-art nonlinear dynamical system models predict a bi-stability phenomenon that is confirmed in ex- periments. However, such deterministic models fail to explain experimental observations of spontaneous transition between the two stable states in the system and the simultaneous occurrence of both steady states in a population of cells. In this paper, we propose a stochastic model that explains this phenomenon. Furthermore, we also extract a coarser two-state continuous-time Markov chain as an higher level abstraction of this model, and show that macroscopic properties are retained in the abstraction. I. I NTRODUCTION |
Year | DOI | Venue |
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2006 | 10.1109/CDC.2006.376739 | conference on decision and control |
Keywords | DocType | ISSN |
Markov processes,biocontrol,continuous time systems,feedback,microorganisms,nonlinear dynamical systems,stability,sugar,Escherichia coli bacteria,continuous-time Markov chain,finite state abstraction,gene network,lactose regulation system,nonlinear dynamical system,positive feedback,stability,stochastic model | Conference | 0743-1546 |
Citations | PageRank | References |
3 | 0.72 | 5 |
Authors | ||
4 |
Name | Order | Citations | PageRank |
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A. Agung Julius | 1 | 396 | 43.88 |
Ádám Halász | 2 | 203 | 13.41 |
Vijay Kumar | 3 | 1158 | 187.91 |
George Pappas | 4 | 6632 | 540.42 |