Title
Dimension reduction in principal component analysis for trees.
Abstract
The statistical analysis of tree structured data is a new topic in statistics with wide application areas. Some Principal Component Analysis (PCA) ideas have been previously developed for binary tree spaces. These ideas are extended to the more general space of rooted and ordered trees. Concepts such as tree-line and forward principal component tree-line are redefined for this more general space, and the optimal algorithm that finds them is generalized. An analog of the classical dimension reduction technique in PCA for tree spaces is developed. To do this, backward principal components, the components that carry the least amount of information on tree data set, are defined. An optimal algorithm to find them is presented. Furthermore, the relationship of these to the forward principal components is investigated, and a path-independence property between the forward and backward techniques is proven. These methods are applied to a brain artery data set of 98 subjects. Using these techniques, the effects of aging to the brain artery structure of males and females is investigated. A second data set of the organization structure of a large US company is also analyzed and the structural differences across different types of departments within the company are explored.
Year
DOI
Venue
2014
10.1016/j.csda.2013.12.007
Computational Statistics & Data Analysis
Keywords
Field
DocType
binary tree space,tree space,principal component tree-line,general space,brain artery structure,principal component,tree data,dimension reduction,brain artery data,principal component analysis,optimal algorithm,large us company,combinatorial optimization
Dimensionality reduction,Tree traversal,Binary tree,Combinatorial optimization,Tree structured data,Tree structure,Statistics,Principal component analysis,Mathematics,Statistical analysis
Journal
Volume
ISSN
Citations 
74
0167-9473
5
PageRank 
References 
Authors
0.48
8
5
Name
Order
Citations
PageRank
Carlos A. Alfaro172.63
Burcu Aydın250.48
Carlos E. Valencia3114.99
Elizabeth Bullitt4116287.13
Alim Ladha550.48