Name
Abstract | ||
|---|---|---|
Here, we present PRINSEQ for easy and rapid quality control and data preprocessing of genomic and metagenomic datasets. Summary statistics of FASTA (and QUAL) or FASTQ files are generated in tabular and graphical form and sequences can be filtered, reformatted and trimmed by a variety of options to improve downstream analysis.This open-source application was implemented in Perl and can be used as a stand alone version or accessed online through a user-friendly web interface. The source code, user help and additional information are available at http://prinseq.sourceforge.net/. |
Year | DOI | Venue |
|---|---|---|
2011 | 10.1093/bioinformatics/btr026 | Bioinformatics |
Keywords | Field | DocType |
summary statistic,present prinseq,open-source application,downstream analysis,metagenomic datasets,rapid quality control,fastq file,additional information,graphical form,accessed online,metagenomics,internet,programming languages,quality control,computer graphics | Data mining,Source code,FASTQ format,Computer science,Data pre-processing,Preprocessor,Software,Bioinformatics,User interface,Computer graphics,Perl | Journal |
Volume | Issue | ISSN |
27 | 6 | 1367-4811 |
Citations | PageRank | References |
50 | 3.19 | 4 |
Authors | ||
2 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Robert Schmieder | 1 | 90 | 7.43 |
| Robert Edwards | 2 | 186 | 18.91 |