Name
Abstract | ||
|---|---|---|
MOODS (MOtif Occurrence Detection Suite) is a software package for matching position weight matrices against DNA sequences. MOODS implements state-of-the-art online matching algorithms, achieving considerably faster scanning speed than with a simple brute-force search. MOODS is written in C++, with bindings for the popular BioPerl and Biopython toolkits. It can easily be adapted for different purposes and integrated into existing workflows. It can also be used as a C++ library. |
Year | DOI | Venue |
|---|---|---|
2009 | 10.1093/bioinformatics/btp554 | BIOINFORMATICS |
Keywords | Field | DocType |
position weight matrix,computational biology,algorithms,dna sequence | Position-Specific Scoring Matrices,Suite,Source code,Computer science,Matrix (mathematics),Position weight matrix,Software,Bioinformatics,Documentation,Workflow | Journal |
Volume | Issue | ISSN |
25 | 23 | 1367-4803 |
Citations | PageRank | References |
10 | 0.68 | 9 |
Authors | ||
5 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Janne Korhonen | 1 | 71 | 10.52 |
| Petri Martinmäki | 2 | 10 | 0.68 |
| Cinzia Pizzi | 3 | 139 | 15.73 |
| Pasi Rastas | 4 | 57 | 7.13 |
| Esko Ukkonen | 5 | 2953 | 468.50 |