Title
Dealing with Distances and Transformations for Fuzzy C-Means Clustering of Compositional Data
Abstract
Clustering techniques are based upon a dissimilarity or distance measure between objects and clusters. This paper focuses on the simplex space, whose elements—compositions—are subject to non-negativity and constant-sum constraints. Any data analysis involving compositions should fulfill two main principles: scale invariance and subcompositional coherence. Among fuzzy clustering methods, the FCM algorithm is broadly applied in a variety of fields, but it is not well-behaved when dealing with compositions. Here, the adequacy of different dissimilarities in the simplex, together with the behavior of the common log-ratio transformations, is discussed in the basis of compositional principles. As a result, a well-founded strategy for FCM clustering of compositions is suggested. Theoretical findings are accompanied by numerical evidence, and a detailed account of our proposal is provided. Finally, a case study is illustrated using a nutritional data set known in the clustering literature.
Year
DOI
Venue
2012
10.1007/s00357-012-9105-4
J. Classification
Keywords
Field
DocType
clustering technique,data analysis,simplex space,clustering literature,common log-ratio transformation,compositional data,fcm algorithm,case study,nutritional data,fuzzy clustering method,fcm clustering,fuzzy clustering
Fuzzy clustering,Data mining,CURE data clustering algorithm,Clustering high-dimensional data,Correlation clustering,Consensus clustering,FLAME clustering,Statistics,Cluster analysis,Mathematics,Single-linkage clustering
Journal
Volume
Issue
ISSN
29
2
0176-4268
Citations 
PageRank 
References 
2
0.45
7
Authors
3