Title
Operations On Trajectories With Applications To Coding And Bioinformatics
Abstract
We study binary word operations of the insertion, deletion and substitution type. Many of these operations can be generalized into a unified framework by introducing so-called trajectory condition. This generalization has been previously made for insertion and deletion operations. In this paper we naturally extend this approach also to substitution operations. We study closure properties and decision problems of substitutions on trajectories. The obtained results are then applied to model complex noisy channels and a cryptanalysis problem. Another application concerns the design of sets of DNA strands without undesired bonds.
Year
DOI
Venue
2005
10.1142/S0129054105003145
INTERNATIONAL JOURNAL OF FOUNDATIONS OF COMPUTER SCIENCE
Keywords
Field
DocType
formal languages, trajectory, noisy channel, biocomputing
Combinatorics,Decision problem,Formal language,Computer science,Algorithm,Communication channel,Cryptanalysis,Theoretical computer science,Coding (social sciences),Trajectory,Binary number
Journal
Volume
Issue
ISSN
16
3
0129-0541
Citations 
PageRank 
References 
2
0.39
10
Authors
3
Name
Order
Citations
PageRank
Lila Kari11123124.45
Stavros Konstantinidis228331.10
Petr Sosík347968.66