Name
Title | ||
|---|---|---|
3-D mouse brain model reconstruction from a sequence of 2-D slices in application to Allen brain atlas |
Abstract | ||
|---|---|---|
The paper describes a method of fully automatic 3D-reconstruction of a mouse brain from a sequence of histological coronal 2D slices. The model is constructed via non-linear transformations between the neighboring slices and further morphing. We also use rigid-body transforms in the preprocessing stage to align the slices. Afterwards, the obtained 3D-model is used to generate virtual 2D-images of the brain in arbitrary section-plane. We use this approach to construct a highresolution anatomic 3D-model of a mouse brain using well-known Allen Brain Atlas which is publicly available. |
Year | DOI | Venue |
|---|---|---|
2009 | 10.1007/978-3-642-14571-1_22 | CIBB |
Keywords | Field | DocType |
well-known allen brain atlas,non-linear transformation,mouse brain,highresolution anatomic,allen brain atlas,arbitrary section-plane,2-d slice,neighboring slice,3-d mouse brain model,histological coronal,preprocessing stage,b splines,neuroimaging,linear transformation,high resolution,rigid body,morphing,image registration,3d reconstruction | Computer vision,Morphing,Brain atlas,Computer graphics (images),Computer science,Preprocessor,Artificial intelligence,Neuroimaging,Brain model,Image registration,3D reconstruction | Conference |
Volume | ISSN | ISBN |
6160 | 0302-9743 | 3-642-14570-1 |
Citations | PageRank | References |
2 | 0.44 | 12 |
Authors | ||
3 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| A. Osokin | 1 | 430 | 19.01 |
| Dmitry Vetrov | 2 | 13 | 6.04 |
| Dmitry Kropotov | 3 | 6 | 3.92 |