Name
Abstract | ||
|---|---|---|
Summary: MuSiC is a web server to perform the constrained alignment of a set of sequences, such that the user-specified residues/nucleotides are aligned with each other. The input of the MuSiC system consists of a set of protein/DNA/RNA sequences and a set of user-specified constraints, each with a fragment of residue/nucleotide that (approximately) appears in all input sequences. The output of MuSiC is a constrained multiple sequence alignment in which the fragments of the input sequences whose residues/nucleotides exhibit a given degree of similarity to a constraint are aligned together. The current MuSiC system is implemented in Java language and can be accessed via a simple web interface. Availability: http://genome.life.nctu.edu.tw/MUSIC |
Year | DOI | Venue |
|---|---|---|
2004 | 10.1093/bioinformatics/bth220 | Bioinformatics |
Keywords | Field | DocType |
sequence alignment,web interface,multiple sequence alignment,nucleotides | Sequence alignment,Genome,Sequence logo,Degree of similarity,Computer science,Bioinformatics,Multiple sequence alignment,User interface,Java,Web server | Journal |
Volume | Issue | ISSN |
20 | 14 | 1367-4803 |
Citations | PageRank | References |
17 | 0.86 | 4 |
Authors | ||
4 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Yin-Te Tsai | 1 | 31 | 3.54 |
| Yen Pin Huang | 2 | 30 | 1.48 |
| Ching Ta Yu | 3 | 17 | 0.86 |
| Chin Lung Lu | 4 | 423 | 34.59 |