Abstract | ||
---|---|---|
Rule-based modeling (RBM) is a powerful and increasingly popular approach to modeling intracellular biochemistry. Current interfaces for RBM are predominantly text-based and command-line driven. Better visual tools are needed to make RBM accessible to a broad range of users, to make specification of models less error prone and to improve workflows. We present RULEBENDER, an open-source visual interface that facilitates interactive debugging, simulation and analysis of RBMs. |
Year | DOI | Venue |
---|---|---|
2011 | 10.1093/bioinformatics/btr197 | BIOINFORMATICS |
Keywords | Field | DocType |
computer graphics | Rule-based modeling,Visual interface,Computer science,Expert system,Interactive debugging,Human–computer interaction,Software,Bioinformatics,Workflow,Computer graphics | Journal |
Volume | Issue | ISSN |
27 | 12 | 1367-4803 |
Citations | PageRank | References |
9 | 0.62 | 4 |
Authors | ||
4 |
Name | Order | Citations | PageRank |
---|---|---|---|
Wen Xu | 1 | 9 | 0.62 |
Adam M. Smith | 2 | 382 | 30.98 |
James R Faeder | 3 | 409 | 31.02 |
G Elisabeta Marai | 4 | 136 | 20.43 |