Title
RuleBender: a visual interface for rule-based modeling.
Abstract
Rule-based modeling (RBM) is a powerful and increasingly popular approach to modeling intracellular biochemistry. Current interfaces for RBM are predominantly text-based and command-line driven. Better visual tools are needed to make RBM accessible to a broad range of users, to make specification of models less error prone and to improve workflows. We present RULEBENDER, an open-source visual interface that facilitates interactive debugging, simulation and analysis of RBMs.
Year
DOI
Venue
2011
10.1093/bioinformatics/btr197
BIOINFORMATICS
Keywords
Field
DocType
computer graphics
Rule-based modeling,Visual interface,Computer science,Expert system,Interactive debugging,Human–computer interaction,Software,Bioinformatics,Workflow,Computer graphics
Journal
Volume
Issue
ISSN
27
12
1367-4803
Citations 
PageRank 
References 
9
0.62
4
Authors
4
Name
Order
Citations
PageRank
Wen Xu190.62
Adam M. Smith238230.98
James R Faeder340931.02
G Elisabeta Marai413620.43