Title
Intricate Knots In Proteins: Function And Evolution
Abstract
Our investigation of knotted structures in the Protein Data Bank reveals the most complicated knot discovered to date. We suggest that the occurrence of this knot in a human ubiquitin hydrolase might be related to the role of the enzyme in protein degradation. While knots are usually preserved among homologues, we also identify an exception in a transcarbamylase. This allows us to exemplify the function of knots in proteins and to suggest how they may have been created.
Year
DOI
Venue
2006
10.1371/journal.pcbi.0020122
PLOS COMPUTATIONAL BIOLOGY
Keywords
Field
DocType
computational biology,dna fragmentation,protein data bank,data analysis,protein structure,enzyme,protein binding
Plasma protein binding,Viral Structure,Biology,Ubiquitin,Proteasome,Bioinformatics,Protein Data Bank,Hydrolase,Knot (unit),Protein structure
Journal
Volume
Issue
ISSN
2
9
1553-7358
Citations 
PageRank 
References 
18
2.49
2
Authors
3
Name
Order
Citations
PageRank
Peter Virnau118019.44
Leonid A. Mirny2698.99
Mehran Kardar3415.02