Title
The Rat Genome Database pathway portal.
Abstract
The set of interacting molecules collectively referred to as a pathway or network represents a fundamental structural unit, the building block of the larger, highly integrated networks of biological systems. The scientific community's interest in understanding the fine details of how pathways work, communicate with each other and synergize, and how alterations in one or several pathways may converge into a disease phenotype, places heightened demands on pathway data and information providers. To meet such demands, the Rat Genome Database [(RGD) http://rgd.mcw.edu] has adopted a multitiered approach to pathway data acquisition and presentation. Resources and tools are continuously added or expanded to offer more comprehensive pathway data sets as well as enhanced pathway data manipulation, exploration and visualization capabilities. At RGD, users can easily identify genes in pathways, see how pathways relate to each other and visualize pathways in a dynamic and integrated manner. They can access these and other components from several entry points and effortlessly navigate between them and they can download the data of interest. The Pathway Portal resources at RGD are presented, and future directions are discussed. Database URL: http://rgd.mcw.edu.
Year
DOI
Venue
2011
10.1093/database/bar010
Database
Field
DocType
Volume
Genome,Data mining,Rat Genome Database,World Wide Web,Visualization,Computer science,Information providers,Bioinformatics,Data manipulation language,Gene regulatory network,The Internet
Journal
2011
ISSN
Citations 
PageRank 
1758-0463
5
0.92
References 
Authors
9
11
Name
Order
Citations
PageRank
Victoria Petri113317.76
Mary Shimoyama220035.46
G. Thomas Hayman313213.77
Jennifer R. Smith413218.16
Marek Tutaj5557.43
Jeff de Pons6839.84
Melinda R Dwinell712517.82
Diane H Munzenmaier8547.06
Twigger Simon N914124.60
Howard J Jacob1019128.17
null null116391656.33