Title
Data mining using the Catalogue of Somatic Mutations in Cancer BioMart.
Abstract
Catalogue of Somatic Mutations in Cancer (COSMIC) (http://www.sanger.ac.uk/cosmic) is a publicly available resource providing information on somatic mutations implicated in human cancer. Release v51 (January 2011) includes data from just over 19 000 genes, 161 787 coding mutations and 5573 gene fusions, described in more than 577 000 tumour samples. COSMICMart (COSMIC BioMart) provides a flexible way to mine these data and combine somatic mutations with other biological relevant data sets. This article describes the data available in COSMIC along with examples of how to successfully mine and integrate data sets using COSMICMart.
Year
DOI
Venue
2011
10.1093/database/bar018
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION
Keywords
Field
DocType
mutation,data mining,search engine
Data mining,COSMIC cancer database,Biology,Somatic cell,Bioinformatics,Cancer,Mutation
Journal
Volume
ISSN
Citations 
2011
1758-0463
6
PageRank 
References 
Authors
1.97
5
17
Name
Order
Citations
PageRank
Rebecca Shepherd113715.00
Simon A Forbes241538.51
David Beare336829.03
S Bamford432631.56
Charlotte G Cole527629.10
Sari Ward615510.41
Nidhi Bindal740438.12
Prasad Gunasekaran81128.46
Mingming Jia936641.64
Chai Yin Kok1034033.81
Kenric Leung1124020.01
Andrew Menzies1217323.41
Adam P Butler1362.31
Jon W Teague1427629.10
Peter J Campbell1530024.21
Michael R Stratton1635435.32
P Andrew Futreal1724929.54