Name
Title | ||
|---|---|---|
Segmentation of long genomic sequences into domains with homogeneous composition with BASIO software. |
Abstract | ||
|---|---|---|
We present a software system BASIO that allows one to segment a sequence into regions with homogeneous nucleotide composition at a desired length scale. The system can work with arbitrary alphabet and therefore can be applied to various (e.g. protein) sequences. Several sequences of complete genomes of eukaryotes are used to demonstrate the efficiency of the software. |
Year | DOI | Venue |
|---|---|---|
2001 | 10.1093/bioinformatics/17.11.1065 | BIOINFORMATICS |
Keywords | Field | DocType |
genome sequence | Suite,Source code,Computer science,Segmentation,Homogeneous,Theoretical computer science,Software system,Software,Bioinformatics,Alphabet,Executable | Journal |
Volume | Issue | ISSN |
17 | 11 | 1367-4803 |
Citations | PageRank | References |
0 | 0.34 | 7 |
Authors | ||
4 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Vasily Ramensky | 1 | 17 | 2.33 |
| Vsevolod Makeev | 2 | 90 | 9.70 |
| Mikhail A. Roytberg | 3 | 114 | 54.66 |
| Vladimir G Tumanyan | 4 | 4 | 1.36 |