Title
Use of controlled vocabularies to improve biomedical information retrieval tasks.
Abstract
The high heterogeneity of biomedical vocabulary is a major obstacle for information retrieval in large biomedical collections. Therefore, using biomedical controlled vocabularies is crucial for managing these contents. We investigate the impact of query expansion based on controlled vocabularies to improve the effectiveness of two search engines. Our strategy relies on the enrichment of users' queries with additional terms, directly derived from such vocabularies applied to infectious diseases and chemical patents. We observed that query expansion based on pathogen names resulted in improvements of the top-precision of our first search engine, while the normalization of diseases degraded the top-precision. The expansion of chemical entities, which was performed on the second search engine, positively affected the mean average precision. We have shown that query expansion of some types of biomedical entities has a great potential to improve search effectiveness; therefore a fine-tuning of query expansion strategies could help improving the performances of search engines.
Year
DOI
Venue
2013
10.3233/978-1-61499-289-9-1068
Studies in Health Technology and Informatics
Keywords
Field
DocType
Controlled vocabularies,Normalization,Information Retrieval
Web search query,Data mining,Search engine,Normalization (statistics),Query expansion,Information retrieval,Computer science,Controlled vocabulary,Natural language processing,Artificial intelligence,Concept search,Vocabulary
Conference
Volume
ISSN
Citations 
192
0926-9630
1
PageRank 
References 
Authors
0.35
0
5
Name
Order
Citations
PageRank
Emilie Pasche19915.93
Julien Gobeill230230.42
Dina Vishnyakova311311.16
patrick ruch411722.37
Christian Lovis534955.53