Title
Ranking SVM for multiple kernels output combination in protein-protein interaction extraction from biomedical literature
Abstract
Knowledge about protein-protein interactions unveils the molecular mechanisms of biological processes. This paper presents a multiple kernels learning-based approach to automatically extracting protein-protein interactions from biomedical literature. Experimental evaluations show that our approach can achieve state-of-the-art performance with respect to comparable evaluations, with 64.88% F-score and 88.02% area under the receiver operating characteristics curve (AUC) on the AImed corpus.
Year
DOI
Venue
2010
10.1109/BIBM.2010.5706635
BIBM
Keywords
Field
DocType
protein-protein interaction extraction,f-score,receiver operating characteristics curve,multiple kernels output combination,learning (artificial intelligence),multiple kernels learning,proteins,support vector machines,ranking svm,molecular mechanisms,biology computing,aimed corpus,protein-protein interaction,biomedical literature,learning,sensitivity analysis,feature extraction,receiver operating characteristic curve,support vector machine,protein protein interaction,data mining,molecular mechanics,f score,protein engineering,kernel,learning artificial intelligence,biological process
Kernel (linear algebra),F1 score,Protein–protein interaction,Receiver operating characteristic,Pattern recognition,Ranking SVM,Protein engineering,Computer science,Support vector machine,Feature extraction,Artificial intelligence,Machine learning
Conference
ISSN
ISBN
Citations 
2156-1125
978-1-4244-8307-5
0
PageRank 
References 
Authors
0.34
8
6
Name
Order
Citations
PageRank
Zhihao Yang127036.04
Yuan Lin210416.38
Jiajin Wu3163.93
Nan Tang400.34
Hongfei Lin5768122.52
Yanpeng Li6492.60