Title
The Ergo (Tm) Genome Analysis And Discovery System
Abstract
The ERGO(TM) (http://ergo.integratedgenomics.com/ERGO/) genome analysis and discovery suite is an integration of biological data from genomics, biochemistry, high-throughput expression pro ling, genetics and peer-reviewed journals to achieve comprehensive analysis of genes and genomes. Far beyond any conventional systems that facilitate functional assignments, ERGO combines pattern-based analysis with comparative genomics by visualizing genes within the context of regulation, expression pro ling, phylogenetic clusters, fusion events, networked cellular pathways and chromosomal neighborhoods of other functionally related genes. The result of this multifaceted approach is to provide an extensively curated database of the largest available integration of genomes, with vast collection of reconstructed cellular pathways spanning all domains of life. Although access to ERGO is provided only under subscription, it is already widely used by the academic community. The current version of the system integrates 500 genomes from all domains of life in various levels of completion, 403 of which are available for subscription.
Year
DOI
Venue
2003
10.1093/nar/gkg148
NUCLEIC ACIDS RESEARCH
Keywords
Field
DocType
biological data,comparative genomics,system integration,genetics,high throughput
Genome,Biological data,Phylogenetic tree,Gene,Biology,Genomics,Comparative genomics,Genetics,Gene expression profiling,Three-domain system
Journal
Volume
Issue
ISSN
31
1
0305-1048
Citations 
PageRank 
References 
16
1.36
10
Authors
22
Name
Order
Citations
PageRank
Ross A. Overbeek1760234.40
Niels Larsen28719.68
Theresa Walunas3162.04
Mark D'souza415026.50
Gordon D Pusch521732.32
Eugene Selkov6161.36
Konstantinos Liolios717115.79
Viktor Joukov8161.36
Denis Kaznadzey9161.70
Iain Anderson1025821.25
Anamitra Bhattacharyya11161.36
Henry Burd12161.36
Warren Gardner13161.36
Paul Hanke14161.36
Vinayak Kapatral15161.36
N Mikhailova165215.89
Olga Vasieva17334.95
Andrei L Osterman189812.52
Veronika Vonstein1914510.65
Michael Fonstein2011323.78
Natalia Ivanova211129.49
Nikos Kyrpides2239552.87