Title
Neural Reconstruction with Approximate Message Passing (NeuRAMP).
Abstract
Many functional descriptions of spiking neurons assume a cascade structure where inputs are passed through an initial linear filtering stage that produces a low-dimensional signal that drives subsequent nonlinear stages. This paper presents a novel and systematic parameter estimation procedure for such models and applies the method to two neural estimation problems: (i) compressed-sensing based neural mapping from multi-neuron excitation, and (ii) estimation of neural receptive yields in sensory neurons. The proposed estimation algorithm models the neurons via a graphical model and then estimates the parameters in the model using a recently-developed generalized approximate message passing (GAMP) method. The GAMP method is based on Gaussian approximations of loopy belief propagation. In the neural connectivity problem, the GAMP-based method is shown to be computational efficient, provides a more exact modeling of the sparsity, can incorporate nonlinearities in the output and significantly outperforms previous compressed-sensing methods. For the receptive field estimation, the GAMP method can also exploit inherent structured sparsity in the linear weights. The method is validated on estimation of linear nonlinear Poisson (LNP) cascade models for receptive fields of salamander retinal ganglion cells.
Year
Venue
Field
2011
NIPS
Receptive field,Retinal ganglion,Mathematical optimization,Nonlinear system,Linear filter,Computer science,Artificial intelligence,Graphical model,Estimation theory,Message passing,Machine learning,Belief propagation
DocType
Citations 
PageRank 
Conference
13
0.84
References 
Authors
9
4
Name
Order
Citations
PageRank
Alyson K. Fletcher155241.10
Sundeep Rangan23101163.90
Lav R. Varshney329961.63
Aniruddha Bhargava4313.34