Title
Belief Propagation by Message Passing in Junction Trees: Computing Each Message Faster Using GPU Parallelization
Abstract
Compiling Bayesian networks (BNs) to junction trees and performing belief propagation over them is among the most prominent approaches to computing posteriors in BNs. However, belief propagation over junction tree is known to be computationally intensive in the general case. Its complexity may increase dramatically with the connectivity and state space cardinality of Bayesian network nodes. In this paper, we address this computational challenge using GPU parallelization. We develop data structures and algorithms that extend existing junction tree techniques, and specifically develop a novel approach to computing each belief propagation message in parallel. We implement our approach on an NVIDIA GPU and test it using BNs from several applications. Experimentally, we study how junction tree parameters affect parallelization opportunities and hence the performance of our algorithm. We achieve speedups ranging from 0.68 to 9.18 for the BNs studied.
Year
Venue
Keywords
2012
UAI
bayesian networks,parallel computing
DocType
Volume
Citations 
Journal
abs/1202.3777
9
PageRank 
References 
Authors
0.70
8
3
Name
Order
Citations
PageRank
Zheng Lu111216.35
Ole J. Mengshoel235236.76
Jike Chong313611.62