Abstract | ||
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ONTOFUSION is an ontology-based system designed for biomedical database integration. It is based on two processes: mapping and unification. Mapping is a semi-automated process that uses ontologies to link a database schema with a conceptual framework—named virtual schema. There are three methodologies for creating virtual schemas, according to the origin of the domain ontology used: (1) top-down—e.g. using an existing ontology, such as the UMLS or Gene Ontology—, (2) bottom-up—building a new domain ontology— and (3) a hybrid combination. Unification is an automated process for integrating ontologies and hence the database to which they are linked. Using these methods, we employed ONTOFUSION to integrate a large number of public genomic and clinical databases, as well as biomedical ontologies. |
Year | DOI | Venue |
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2006 | 10.1016/j.compbiomed.2005.02.004 | Computers in Biology and Medicine |
Keywords | DocType | Volume |
Ontologies,Biomedical informatics,Biomedical ontologies,Database integration,Ontology unification | Journal | 36 |
Issue | ISSN | Citations |
7 | 0010-4825 | 39 |
PageRank | References | Authors |
1.98 | 11 | 7 |
Name | Order | Citations | PageRank |
---|---|---|---|
david perezrey | 1 | 135 | 20.28 |
V Maojo | 2 | 89 | 6.65 |
Miguel García-Remesal | 3 | 128 | 13.75 |
Raúl Alonso-Calvo | 4 | 107 | 14.64 |
Holger Billhardt | 5 | 372 | 36.86 |
F Martin-Sanchez | 6 | 100 | 7.62 |
António Sousa Pereira | 7 | 88 | 8.21 |