Title
Dynamic retrospective filtering of physiological noise in BOLD fMRI: DRIFTER.
Abstract
In this article we introduce the DRIFTER algorithm, which is a new model based Bayesian method for retrospective elimination of physiological noise from functional magnetic resonance imaging (fMRI) data. In the method, we first estimate the frequency trajectories of the physiological signals with the interacting multiple models (IMM) filter algorithm. The frequency trajectories can be estimated from external reference signals, or if the temporal resolution is high enough, from the fMRI data. The estimated frequency trajectories are then used in a state space model in combination of a Kalman filter (KF) and Rauch–Tung–Striebel (RTS) smoother, which separates the signal into an activation related cleaned signal, physiological noise, and white measurement noise components. Using experimental data, we show that the method outperforms the RETROICOR algorithm if the shape and amplitude of the physiological signals change over time.
Year
DOI
Venue
2012
10.1016/j.neuroimage.2012.01.067
NeuroImage
Keywords
DocType
Volume
Functional magnetic resonance imaging,Physiological noise,Kalman filter,RTS smoother,Interacting multiple models,Bayesian inference
Journal
60
Issue
ISSN
Citations 
2
1053-8119
27
PageRank 
References 
Authors
1.19
16
7
Name
Order
Citations
PageRank
Simo Särkkä162366.52
Arno Solin213617.38
Aapo Nummenmaa325619.18
Aki Vehtari449851.48
Toni Auranen5795.09
Simo Vanni67718.51
Fa-Hsuan Lin724624.33