Abstract | ||
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It is well known that the geometric structure of a protein is an important factor to determine its functions. In particular,
the atoms located at the boundary of a protein are more important since various physicochemical reactions happen in the boundary
of the protein. The β-shape is a powerful tool for the analysis of atoms located at the boundary since it provides the complete information of
the proximity among these atoms. However, β-shapes are difficult to handle and require heavy weight data structures since they form non-manifold structure. In this paper,
we propose topology operators for converting a β-shape into a manifold. Once it is converted, compact data structures for representing a manifold are available. In addition,
general topology operators used for manifold structures can also be available for various applications.
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Year | DOI | Venue |
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2008 | 10.1007/978-3-540-79246-8_40 | GMP |
Keywords | DocType | Citations |
non-manifold,β-complex,manifoldization.,β-shapes | Conference | 1 |
PageRank | References | Authors |
0.36 | 8 | 4 |
Name | Order | Citations | PageRank |
---|---|---|---|
Donguk Kim | 1 | 296 | 26.68 |
Changhee Lee | 2 | 19 | 6.81 |
Youngsong Cho | 3 | 250 | 22.15 |
Deok-Soo Kim | 4 | 633 | 59.12 |