Name
Title | ||
|---|---|---|
emPAI Calc--for the estimation of protein abundance from large-scale identification data by liquid chromatography-tandem mass spectrometry. |
Abstract | ||
|---|---|---|
AemPAI Calc is an open-source web application for the estimation of protein abundance. It uses the correlation between the number of identified peptides and protein abundance in mass spectrometry-based proteomic experiments. The program is the first implementation of our previously reported emPAI algorithm; it calculates the emPAI from the protein identification results obtained by database search engines such as Mascot.(TM) |
Year | DOI | Venue |
|---|---|---|
2010 | 10.1093/bioinformatics/btp700 | BIOINFORMATICS |
Keywords | Field | DocType |
liquid chromatography,tandem mass spectrometry | Data mining,Protein identification,Liquid chromatography–mass spectrometry,Computer science,Database search engine,Mass spectrometry | Journal |
Volume | Issue | ISSN |
26 | 4 | 1367-4803 |
Citations | PageRank | References |
2 | 0.66 | 0 |
Authors | ||
3 | ||
Name | Order | Citations | PageRank |
|---|---|---|---|
| Kosaku Shinoda | 1 | 27 | 1.92 |
| Masaru Tomita | 2 | 1009 | 180.20 |
| Yasushi Ishihama | 3 | 37 | 4.71 |