Paper Info
Title
YMD: a microarray database for large-scale gene expression analysis.
Abstract
The use of microarray technology to perform parallel analysis of the expression pattern of a large number of genes in a single experiment has created a new frontier of medical research. The vast amount of gene expression data generated from multiple microarray experiments requires a robust database system that allows efficient data storage, retrieval secure access, data dissemination, and integrated data analyses. To address the growing needs of microarray researchers at Yale and their collaborators, we have built the Yale Microarray Database (YMD). YMD is Web-accessible with the following features: (i) a Web program that tracks DNA samples between source plates and arrays, (ii) the capability of finding common genes/clones across different array platforms, (iii) an image file server, (iv) laboratory-based user management and access privileges, (v) project management, (vi) template data entry, (vii) linking gene expression data to annotation databases for functional analysis. YMD is currently being used on a pilot basis by several laboratories for different organisms and array platforms.
Year
Venue
Keywords
2002
AMIA 2002 SYMPOSIUM, PROCEEDINGS: BIOMEDICAL INFORMATICS: ONE DISCIPLINE
gene expression,gene expression profiling
Field
DocType
ISSN
Data mining,Annotation,Computer science,Gene expression,Image file formats,Dissemination,Software,Gene chip analysis,Microarray databases,Gene expression profiling
Conference
1531-605X
Citations 
PageRank 
References 
6
0.95
6
Authors
16
Name
Order
Citations
PageRank
Kei-hoi Cheung166460.65
K. White210111.43
Janet Hager3111.85
Mark Gerstein435445.41
Valerie Reinke561.62
Kenneth Nelson660.95
Peter Masiar7255.21
Ranjana Srivastava8101.78
Yuli Li9163.57
Ju Li1061.29
Hongyu Zhao1185089.39
Jinming Li12215.35
David B Allison131389.96
Michael Snyder1413826.15
Perry Miller1571.69
Kenneth Williams1616621.56