Title
Chemical Graphs, Chemical Reaction Graphs, and Chemical Graph Transformation
Abstract
Chemical reactions are described by edge relabeling graph transformation rules, in which a substrate chemical graph is transformed into a product chemical graph by breaking existing bonds and creating new bonds between atoms. These edge relabeling graph transformation rules are themselves chemical graphs, where the order of a bond before the chemical reaction is distinguished from the order of the bond after the chemical reaction. The approach is illustrated by an implementation on top of the PerlMol collection of Perl modules for computational chemistry.
Year
DOI
Venue
2005
10.1016/j.entcs.2004.12.033
Electr. Notes Theor. Comput. Sci.
Keywords
Field
DocType
explicit chemical reaction,product chemical graph,chemical reaction,perlmol.,chemical graph,substrate chemical graph,graph transformation rule,perlmol collection,chemical graphs,edge relabeling,existing bond,new bond,perlmol,perl module,chemical graph transformation,chemical reaction graphs,graph transformation,computational chemistry
Substrate (chemistry),Discrete mathematics,Graph,Combinatorics,Computer science,Atom,Graph rewriting,Graph product,Chemical reaction,Perl
Journal
Volume
Issue
ISSN
127
1
Electronic Notes in Theoretical Computer Science
Citations 
PageRank 
References 
7
0.50
6
Authors
2
Name
Order
Citations
PageRank
Francesc Rosselló124429.09
Gabriel Valiente274263.30