Title
Cytoskeletal Signaling: Is Memory Encoded In Microtubule Lattices By Camkii Phosphorylation?
Abstract
Memory is attributed to strengthened synaptic connections among particular brain neurons, yet synaptic membrane components are transient, whereas memories can endure. This suggests synaptic information is encoded and 'hard-wired' elsewhere, e. g. at molecular levels within the post-synaptic neuron. In long-term potentiation (LTP), a cellular and molecular model for memory, post-synaptic calcium ion (Ca2+) flux activates the hexagonal Ca2+-calmodulin dependent kinase II (CaMKII), a dodacameric holoenzyme containing 2 hexagonal sets of 6 kinase domains. Each kinase domain can either phosphorylate substrate proteins, or not (i.e. encoding one bit). Thus each set of extended CaMKII kinases can potentially encode synaptic Ca2+ information via phosphorylation as ordered arrays of binary 'bits'. Candidate sites for CaMKII phosphorylation-encoded molecular memory include microtubules (MTs), cylindrical organelles whose surfaces represent a regular lattice with a pattern of hexagonal polymers of the protein tubulin. Using molecular mechanics modeling and electrostatic profiling, we find that spatial dimensions and geometry of the extended CaMKII kinase domains precisely match those of MT hexagonal lattices. This suggests sets of six CaMKII kinase domains phosphorylate hexagonal MT lattice neighborhoods collectively, e. g. conveying synaptic information as ordered arrays of six "bits'', and thus "bytes'', with 64 to 5,281 possible bit states per CaMKII-MT byte. Signaling and encoding in MTs and other cytoskeletal structures offer rapid, robust solid-state information processing which may reflect a general code for MT-based memory and information processing within neurons and other eukaryotic cells.
Year
DOI
Venue
2012
10.1371/journal.pcbi.1002421
PLOS COMPUTATIONAL BIOLOGY
Keywords
Field
DocType
electrostatics,cytoskeleton,phosphorylation,signal transduction,memory,microtubules,information processing,computer simulation
Long-term potentiation,Tubulin,Biology,Microtubule,Molecular memory,Cytoskeleton,Ca2+/calmodulin-dependent protein kinase,Cell biology,Signal transduction,Bioinformatics,Protein kinase domain
Journal
Volume
Issue
ISSN
8
3
1553-734X
Citations 
PageRank 
References 
10
1.40
4
Authors
3
Name
Order
Citations
PageRank
T.J.A. Craddock1122.82
Jack A. Tuszynski23211.45
Stuart R. Hameroff3215.13