Title
Overview of the infectious diseases (ID) task of BioNLP Shared Task 2011
Abstract
This paper presents the preparation, resources, results and analysis of the Infectious Diseases (ID) information extraction task, a main task of the BioNLP Shared Task 2011. The ID task represents an application and extension of the BioNLP'09 shared task event extraction approach to full papers on infectious diseases. Seven teams submitted final results to the task, with the highest-performing system achieving 56% F-score in the full task, comparable to state-of-the-art performance in the established BioNLP'09 task. The results indicate that event extraction methods generalize well to new domains and full-text publications and are applicable to the extraction of events relevant to the molecular mechanisms of infectious diseases.
Year
Venue
Keywords
2011
BioNLP@ACL (Shared Task)
id task,infectious disease,main task,bionlp shared task,established bionlp,information extraction task,shared task event extraction,full task,full paper,event extraction method
Field
DocType
Citations 
Computer science,Biomedical text mining,Information extraction,Natural language processing,Artificial intelligence
Conference
24
PageRank 
References 
Authors
1.07
21
9
Name
Order
Citations
PageRank
Sampo Pyysalo11941100.14
Tomoko Ohta2179493.54
Rafal Rak338218.30
dan sullivan4332.04
chunhong mao515710.55
Chunxia Wang6603.61
Bruno Sobral7331.71
Jun'ichi Tsujii83610232.96
Sophia Ananiadou92658183.08