Title
synbreed: a framework for the analysis of genomic prediction data using R.
Abstract
We present a novel R package named synbreed to derive genome-based predictions from high-throughput genotyping and large-scale phenotyping data. The package contains a comprehensive collection of functions required to fit and cross-validate genomic prediction models. All functions are embedded within the framework of a single, unified data object. Thereby a versatile genomic prediction analysis pipeline covering data processing, visualization and analysis is established within one software package. The implementation is flexible with respect to a wide range of data formats and models. The package fills an existing gap in the availability of user-friendly software for next-generation genetics research and education.
Year
DOI
Venue
2012
10.1093/bioinformatics/bts335
BIOINFORMATICS
Field
DocType
Volume
Data mining,Data processing,Computer science,Visualization,Software,Data objects,Bioinformatics,R package
Journal
28
Issue
ISSN
Citations 
15
1367-4803
1
PageRank 
References 
Authors
0.41
1
4
Name
Order
Citations
PageRank
Valentin Wimmer110.75
Theresa Albrecht210.41
Hans-Jürgen Auinger310.41
Chris-Carolin Schön410.41