Title
Using ODIN for a PharmGKB revalidation experiment.
Abstract
The need for efficient text-mining tools that support curation of the biomedical literature is ever increasing. In this article, we describe an experiment aimed at verifying whether a text-mining tool capable of extracting meaningful relationships among domain entities can be successfully integrated into the curation workflow of a major biological database. We evaluate in particular (i) the usability of the system's interface, as perceived by users, and (ii) the correlation of the ranking of interactions, as provided by the text-mining system, with the choices of the curators.
Year
DOI
Venue
2012
10.1093/database/bas021
DATABASE-THE JOURNAL OF BIOLOGICAL DATABASES AND CURATION
Field
DocType
Volume
Data mining,Revalidation,Information retrieval,Ranking,Computer science,Usability,Biological database,Data curation,PharmGKB,Bioinformatics,Workflow
Journal
2012
ISSN
Citations 
PageRank 
1758-0463
14
0.83
References 
Authors
18
10
Name
Order
Citations
PageRank
Fabio Rinaldi140436.53
Simon Clematide223227.86
Yael Garten31838.73
Michelle Whirl-Carrillo4394.23
Li Gong5353.34
Joan M Hebert616426.63
Katrin Sangkuhl7141.17
Caroline F Thorn8151.17
Teri E. Klein928178.21
Russ B. Altman102500456.07