Paper Info
Title
Viewing Genome Data as Objects for Application Development.
Abstract
Genomics is becoming a data-intensive science, and an in- creasing number of laboratories are generating data which swamps storage in traditional paper-and-ink notebooks. Capturing the data flow requires large systems with multi- ple applications manipulating the same or similar data. Large systems often have conflicting requirements for data representation. Consistency across applications is a prime consideration, and appropriate data representation is an important issue in developing practical systems for molecu- lar biologists. Graphs are a natural representation for de- scribing genome data, while objects are good for modeling the behavior necessary for laboratory applications. We present a method for translating graph descriptions of ge- nome data into objects using objects as views on graphs. Graph representations describe genome concepts while ob- jects capture individual views for application development insuring consistency across genome applications.
Year
Venue
Keywords
1995
ISMB
data flow,application development,data representation,graph representation
Field
DocType
Volume
Prime (order theory),Genome,Graph,External Data Representation,Computer science,Genomics,Software,Artificial intelligence,Bioinformatics,Computer graphics,Machine learning,Data flow diagram
Conference
3
ISSN
Citations 
PageRank 
1553-0833
0
0.34
References 
Authors
9
3
Name
Order
Citations
PageRank
Ellen R. Bergeman100.68
Mark Graves2139.30
C. B. Lawrence3229.04