Title
Druggability of methyl-lysine binding sites.
Abstract
Structural modules that specifically recognize--or read--methylated or acetylated lysine residues on histone peptides are important components of chromatin-mediated signaling and epigenetic regulation of gene expression. Deregulation of epigenetic mechanisms is associated with disease conditions, and antagonists of acetyl-lysine binding bromodomains are efficacious in animal models of cancer and inflammation, but little is known regarding the druggability of methyl-lysine binding modules. We conducted a systematic structural analysis of readers of methyl marks and derived a predictive druggability landscape of methyl-lysine binding modules. We show that these target classes are generally less druggable than bromodomains, but that some proteins stand as notable exceptions.
Year
DOI
Venue
2011
10.1007/s10822-011-9505-2
Journal of computer-aided molecular design
Keywords
Field
DocType
Druggability,Binding pocket,Methyl-lysine,Inhibitors,Epigenetics
Druggability,Bromodomain,Binding site,Histone,Biochemistry,Chemistry,Gene expression,Bioinformatics,Lysine,Acetylation,Epigenetics
Journal
Volume
Issue
ISSN
25
12
1573-4951
Citations 
PageRank 
References 
1
0.36
3
Authors
3
Name
Order
Citations
PageRank
Calvin Santiago110.36
Kong T. Nguyen2111.63
Matthieu Schapira3214.41