Paper Info
Title
GenSAS — An online integrated genome sequence annotation pipeline
Abstract
We present a Web-based genome sequence annotation tool called GenSAS, the Genome Sequence Annotation Server. Advances in DNA sequencing technology and Web technologies have significantly reduced the costs associated with sequencing an organism's genome, including the operating costs of hardware and software. However, researchers need to use multiple annotation tools to increase the accuracy of the annotation results, and the labor cost of analyzing the sequence data is still high due to the non uniform input and output formats used in each tool. There are many individual web based tools available for gene annotation, but GenSAS is unique in that it offers a one-stop website with a single graphical interface for running multiple structural and functional annotation tools, visualization and manual curation of genome. GenSAS improves the overall performance by distributing the work between the server and client machine and supports a streamlined workflow that further simplifies the tasks and reduces the overall processing time.
Year
DOI
Venue
2011
10.1109/BMEI.2011.6098712
2011 4th International Conference on Biomedical Engineering and Informatics (BMEI)
Keywords
Field
DocType
genomics tool,sequencing,annotation,web application,genome browser
Genome,Minimum information required in the annotation of models,Computer science,Image retrieval,Genomics,Artificial intelligence,Web application,Workflow,World Wide Web,Annotation,Information retrieval,Pattern recognition,Gene Annotation
Conference
Volume
ISSN
ISBN
4
1948-2914
978-1-4244-9351-7
Citations 
PageRank 
References 
1
0.37
7
Authors
6
Name
Order
Citations
PageRank
Taein Lee1485.84
Cameron Peace2111.65
Sook Jung3789.52
Ping Zheng4211.95
Dorrie Main5758.44
Ilhyung Cho6629.34