Paper Info
Title
BioCASE: Accelerating Software Development of Genome-Wide Filtering Applications
Abstract
Due to the high pace that algorithms for scanning genome-wide datasets are produced, most of the software is quickly released. As a consequence, they usually lack in system portability and only provide a text-based user interface. BioCASE is an open-source tool developed to assist bioinformaticians in the task of producing software to perform any kind of computationally-expensive genome-wide scanning. BioCASE will produce efficient software with some other added features such as to be portable, to have a graphical user interface (GUI) and to be easily set up. A first version of BioCASE (http://bios.ugr.es/biocase) has been completed and it is being currently used in the design of a genome- wide tool to perform variable selection of genotype data sets based on multivariate association and transmission-disequilibrium tests.
Year
DOI
Venue
2009
10.1007/978-3-642-02481-8_166
IWANN (2)
Keywords
Field
DocType
high pace,computationally-expensive genome-wide,efficient software,added feature,genome-wide filtering applications,genome-wide datasets,accelerating software development,wide tool,open-source tool,genotype data,graphical user interface,text-based user interface,case tools,feature selection,filtering,graphic user interface,software development,user interface,variable selection,genome
Data mining,Feature selection,Computer science,Graphical user interface,Software,Software portability,Graphical user interface testing,Computer-aided software engineering,User interface,Operating system,Software development
Conference
Volume
ISSN
Citations 
5518
0302-9743
1
PageRank 
References 
Authors
0.38
3
2
Name
Order
Citations
PageRank
Rosana Montes1467.43
María M Abad-Grau2245.78