Paper Info
Title
DASMIweb: online integration, analysis and assessment of distributed protein interaction data.
Abstract
In recent years, we have witnessed a substantial increase of the amount of available protein interaction data. However, most data are currently not readily accessible to the biologist at a single site, but scattered over multiple online repositories. Therefore, we have developed the DASMIweb server that affords the integration, analysis and qualitative assessment of distributed sources of interaction data in a dynamic fashion. Since DASMIweb allows for querying many different resources of protein and domain interactions simultaneously, it serves as an important starting point for interactome studies and assists the user in finding publicly accessible interaction data with minimal effort. The pool of queried resources is fully configurable and supports the inclusion of own interaction data or confidence scores. In particular, DASMIweb integrates confidence measures like functional similarity scores to assess individual interactions. The retrieved results can be exported in different file formats like MITAB or SIF. DASMIweb is freely available at http://www.dasmiweb.de.
Year
DOI
Venue
2009
10.1093/nar/gkp438
NUCLEIC ACIDS RESEARCH
Keywords
Field
DocType
internet,systems integration
File format,Confidence measures,World Wide Web,Interactome,Biology,Software,Bioinformatics,Genetics,System integration,The Internet
Journal
Volume
Issue
ISSN
37
SUPnan
0305-1048
Citations 
PageRank 
References 
0
0.34
43
Authors
4
Name
Order
Citations
PageRank
Hagen Blankenburg1757.53
Fidel Ramírez21399.50
Joachim Büch3102.26
Mario Albrecht434924.74