Title
On the sparse reconstruction of gene networks.
Abstract
We discuss a heuristic method for the sparse reconstruction of gene networks. The method is based on iterative greedy algorithms, and uses gene expression data from microarray experiments. Also, we show numerically that the greedy algorithms are able to give good approximative solutions to the sparse reconstruction problem even in the presence of significant levels of noise.
Year
DOI
Venue
2008
10.1089/cmb.2007.0185
JOURNAL OF COMPUTATIONAL BIOLOGY
Keywords
Field
DocType
gene networks inference,combinatorial optimization,statistical mechanics,stochastic processes
Heuristic,Reconstruction problem,Computer science,Sparse approximation,Stochastic process,Combinatorial optimization,Greedy algorithm,Artificial intelligence,Bioinformatics,Gene regulatory network,Machine learning
Journal
Volume
Issue
ISSN
15.0
1
1066-5277
Citations 
PageRank 
References 
5
0.50
4
Authors
2
Name
Order
Citations
PageRank
Mircea Andrecut1738.52
Stuart Kauffman224532.76