Name
Abstract | ||
|---|---|---|
We introduce an approach to the automatic generation of biological pathway diagrams from scientific literature. It is composed of the automatic extraction of single interaction relations which are typically found in the full text (rather than the abstract) of a scientific publication, and their subsequent integration into a complex pathway diagram. Our focus is here on relation extraction from full-text documents. We compare the performance of automatic full-text extraction procedures with a manually generated gold standard in order to validate the extracted data which serve as input for the pathway integration procedure. |
Year | DOI | Venue |
|---|---|---|
2011 | 10.1007/978-3-642-24800-9_9 | IDA |
Keywords | Field | DocType |
towards automatic pathway generation,scientific literature,scientific publication,automatic extraction,biological full-text publication,full-text document,automatic full-text extraction procedure,automatic generation,pathway integration procedure,complex pathway diagram,biological pathway diagram,relation extraction | Scientific literature,Information retrieval,Computer science,Diagram,Relationship extraction | Conference |
Volume | ISSN | Citations |
7014 | 0302-9743 | 0 |
PageRank | References | Authors |
0.34 | 14 | 4 |
Name | Order | Citations | PageRank |
|---|---|---|---|
| Ekaterina Buyko | 1 | 165 | 11.45 |
| Jörg Linde | 2 | 27 | 2.77 |
| Steffen Priebe | 3 | 115 | 7.87 |
| Udo Hahn | 4 | 937 | 88.14 |