Title
Assertion modeling and its role in clinical phenotype identification
Abstract
This paper describes an approach to assertion classification and an empirical study on the impact this task has on phenotype identification, a real world application in the clinical domain. The task of assertion classification is to assign to each medical concept mentioned in a clinical report (e.g., pneumonia, chest pain) a specific assertion category (e.g., present, absent, and possible). To improve the classification of medical assertions, we propose several new features that capture the semantic properties of special cue words highly indicative of a specific assertion category. The results obtained outperform the current state-of-the-art results for this task. Furthermore, we confirm the intuition that assertion classification contributes in significantly improving the results of phenotype identification from free-text clinical records.
Year
DOI
Venue
2013
10.1016/j.jbi.2012.09.001
Journal of Biomedical Informatics
Keywords
Field
DocType
natural language processing
Computer science,Assertion,Intuition,Semantic property,Natural language processing,Artificial intelligence,Empirical research
Journal
Volume
Issue
ISSN
46
1
1532-0464
Citations 
PageRank 
References 
10
0.61
19
Authors
4
Name
Order
Citations
PageRank
Cosmin Adrian Bejan126016.11
Lucy Vanderwende2105179.54
Fei Xia3459.17
Meliha Yetisgen-Yildiz432834.25