Title | ||
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MetaRank: a rank conversion scheme for comparative analysis of microbial community compositions. |
Abstract | ||
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Results: We developed the MetaRank scheme to convert abundances into ranks. MetaRank employs a series of statistical hypothesis tests to compare abundances within a microbial community and determine their ranks. We applied MetaRank to synthetic samples and real metagenomes. The results confirm that MetaRank can reduce the effects of sampling biases and clarify the characteristics of metagenomes in comparative studies of microbial communities. Therefore, MetaRank provides a useful rank-based approach to analyzing microbiomes. |
Year | DOI | Venue |
---|---|---|
2011 | 10.1093/bioinformatics/btr583 | BIOINFORMATICS |
Field | DocType | Volume |
Ecology,Biology,Genetic Materials,Metagenomics,Sampling (statistics),Bioinformatics,Microbial population biology,Statistical hypothesis testing | Journal | 27 |
Issue | ISSN | Citations |
24 | 1367-4803 | 1 |
PageRank | References | Authors |
0.39 | 10 | 3 |
Name | Order | Citations | PageRank |
---|---|---|---|
Tse-Yi Wang | 1 | 81 | 6.39 |
Chien-Hao Su | 2 | 27 | 2.27 |
Huai-Kuang Tsai | 3 | 132 | 14.33 |