Title
Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer's disease.
Abstract
In a genome-wide association study of structural brain degeneration, we mapped the 3D profile of temporal lobe volume differences in 742 brain MRI scans of Alzheimer's disease patients, mildly impaired, and healthy elderly subjects. After searching 546,314 genomic markers, 2 single nucleotide polymorphisms (SNPs) were associated with bilateral temporal lobe volume (P<5×10−7). One SNP, rs10845840, is located in the GRIN2B gene which encodes the N-methyl-d-aspartate (NMDA) glutamate receptor NR2B subunit. This protein – involved in learning and memory, and excitotoxic cell death – has age-dependent prevalence in the synapse and is already a therapeutic target in Alzheimer's disease. Risk alleles for lower temporal lobe volume at this SNP were significantly over-represented in AD and MCI subjects vs. controls (odds ratio=1.273; P=0.039) and were associated with mini-mental state exam scores (MMSE; t=−2.114; P=0.035) demonstrating a negative effect on global cognitive function. Voxelwise maps of genetic association of this SNP with regional brain volumes, revealed intense temporal lobe effects (FDR correction at q=0.05; critical P=0.0257). This study uses large-scale brain mapping for gene discovery with implications for Alzheimer's disease.
Year
DOI
Venue
2010
10.1016/j.neuroimage.2010.02.068
NeuroImage
Keywords
Field
DocType
glutamate receptor,genome wide association study,brain mapping,cell death,genotype,magnetic resonance imaging,alzheimer disease,single nucleotide polymorphism,cognitive function,genetic association,odd ratio
Brain mapping,Alzheimer's disease,Genome-wide association study,Psychology,Neurodegeneration,Genetic association,Single-nucleotide polymorphism,Bioinformatics,SNP,Temporal lobe
Journal
Volume
Issue
ISSN
51
2
1053-8119
Citations 
PageRank 
References 
15
1.14
8
Authors
27
Name
Order
Citations
PageRank
Jason L. Stein11038.25
Xue Hua236125.75
Jonathan H. Morra322413.23
Lee Suh422814.70
Derrek P. Hibar510110.75
April J. Ho6856.24
Alex D. Leow751744.28
Arthur W. Toga83128261.46
Jae Hoon Sul9223.07
Hyun Min Kang10224.81
Eleazar Eskin111790170.53
Saykin Andrew J1263166.57
Li Shen13863102.99
Tatiana Foroud141109.62
Nathan Pankratz151068.10
Matthew J. Huentelman16747.69
David W. Craig178914.37
Jill D. Gerber18151.14
April N. Allen19162.10
Jason J. Corneveaux20162.10
Dietrich A Stephan21284.02
Jennifer Webster22272.92
Bryan M. DeChairo23625.04
Steven G. Potkin2414115.23
Jack Clifford R25856.82
Michael W Weiner2665859.51
Paul Thompson273860321.32