Name
Abstract | ||
|---|---|---|
We report on a major update (version 2) of the original SHort Read Mapping Program (SHRiMP). SHRiMP2 primarily targets mapping sensitivity, and is able to achieve high accuracy at a very reasonable speed. SHRiMP2 supports both letter space and color space (AB/SOLiD) reads, enables for direct alignment of paired reads and uses parallel computation to fully utilize multi- core architectures. |
Year | DOI | Venue |
|---|---|---|
2011 | 10.1093/bioinformatics/btr046 | BIOINFORMATICS |
Field | DocType | Volume |
Color space,Source code,Computer science,Bioinformatics,Executable | Journal | 27 |
Issue | ISSN | Citations |
7 | 1367-4803 | 44 |
PageRank | References | Authors |
2.00 | 7 | 5 |
Name | Order | Citations | PageRank |
|---|---|---|---|
| Matei David | 1 | 55 | 5.11 |
| Misko Dzamba | 2 | 55 | 2.44 |
| Dan Lister | 3 | 44 | 2.00 |
| Lucian Ilie | 4 | 840 | 76.50 |
| Michael Brudno | 5 | 67 | 4.03 |