Title
Can neural network constraints in GP provide power to detect genes associated with human disease?
Abstract
A major goal of human genetics is the identification of susceptibility genes associated with common, complex diseases. Identifying gene-gene and gene-environment interactions which comprise the genetic architecture for a majority of common diseases is a difficult challenge. To this end, novel computational approaches have been applied to studies of human disease. Previously, a GP neural network (GPNN) approach was employed. Although the GPNN method has been quite successful, a clear comparison of GPNN and GP alone to detect genetic effects has not been made. In this paper, we demonstrate that using NN evolved by GP can be more powerful than GP alone. This is most likely due to the confined search space of the GPNN approach, in comparison to a free form GP. This study demonstrates the utility of using GP to evolve NN in studies of the genetics of common, complex human disease.
Year
DOI
Venue
2005
10.1007/978-3-540-32003-6_5
EvoWorkshops
Keywords
Field
DocType
complex disease,human disease,human genetics,gp neural network,clear comparison,network constraint,common disease,complex human disease,gpnn method,genetic architecture,gpnn approach,search space,neural network,gene environment interaction,genetics
Human genetics,Genetic architecture,Gene,Evolutionary algorithm,Computer science,Multifactor dimensionality reduction,Computational biology,Free form,Human disease,Artificial neural network,Distributed computing
Conference
Volume
ISSN
ISBN
3449
0302-9743
3-540-25396-3
Citations 
PageRank 
References 
3
0.56
6
Authors
4
Name
Order
Citations
PageRank
William S. Bush116118.45
Alison A. Motsinger28210.00
Scott M. Dudek320626.27
Marylyn D. Ritchie469286.79