Title
Tailored strategies for the analysis of metabolomic data
Abstract
Differences in tissues arising from a single organism are attributable, at least partially, to differing metabolic regimes. A highly topical instance of this is the Warburg effect in tumour development, whereby malignant tissue exhibits greatly altered metabolism compared to healthy tissue. To this end, we consider the emergent properties of two metabolomic datasets from a human glioma cell line (U87) and a human mesenchymal stem cell line (hMSC). Using a random matrix theory (RMT) approach, U87 is found to have a modular structure, whereas hMSC does not. The datasets are then compared using between groups comparison of principal components, and finally, a group of metabolites is found that remains highly correlated in both conditions.
Year
DOI
Venue
2012
10.1007/978-3-642-28792-3_12
IPCAT
Keywords
Field
DocType
human glioma cell line,tailored strategy,metabolomic datasets,malignant tissue,healthy tissue,groups comparison,metabolic regime,altered metabolism,warburg effect,emergent property,human mesenchymal stem cell
Cell culture,Biology,Mesenchymal stem cell,U87,Glioma,Metabolomics,Metabolic network,Bioinformatics,Computational biology,Warburg effect,Principal component analysis
Conference
Citations 
PageRank 
References 
0
0.34
5
Authors
3
Name
Order
Citations
PageRank
Kristen Feher110.73
Kathrin Jürchott210.73
Joachim Selbig377293.34