Title
Performance evaluation of protein sequence clustering tools
Abstract
This paper aims to evaluate the clustering quality of various protein clustering tools that are publicly available as standalone applications. We first review the current protein sequence clustering methods, and introduce a new incrementally clustering tool denoted as PINC. We then propose an intuitive performance metric for evaluating them. The evaluation results of the tools on the public database Pfam are reported.
Year
DOI
Venue
2005
10.1007/11428848_112
International Conference on Computational Science (2)
Keywords
Field
DocType
standalone application,new incrementally,public database pfam,evaluation result,various protein,current protein sequence,performance evaluation,intuitive performance,clustering quality,protein sequence
Data mining,Protein sequencing,Computer science,Performance metric,Cluster analysis
Conference
Volume
ISSN
ISBN
3515
0302-9743
3-540-26043-9
Citations 
PageRank 
References 
1
0.37
10
Authors
2
Name
Order
Citations
PageRank
Haifeng Liu110.37
Loo-Nin Teow210317.29