Paper Info
Title
SIBIOS ontology: a robust package for the integration and pipelining of bioinformatics services
Abstract
The recent technological advancements in biological research have allowed researchers to advance their knowledge of the domain far beyond expectations. The advent of easily accessible biological web databases such as NCBI databases and associated tools such as BLAST are key components to this development. However, with the growing number of these web based biological research tools and data sources, the time necessary to invest in becoming a domain expert is immense. Therefore, it is important to allow for easy user deployment of the wealth of available data sources and tools necessary to conduct biological research. In this paper we discuss an approach to create and maintain a robust ontology knowledge base that serves as the core for SIBIOS, a workflow based integration system for bioinformatics tools and data sources. Further, deployment of the ontology in various components of SIBIOS is discussed.
Year
DOI
Venue
2006
10.1007/11799511_10
DILS
Keywords
Field
DocType
robust package,bioinformatics tool,accessible biological web databases,bioinformatics service,biological research,available data source,sibios ontology,biological research tool,robust ontology knowledge base,easy user deployment,domain expert,ncbi databases,data source,integrable system,knowledge base,data integrity,fault tolerant
Ontology (information science),Data integration,Data mining,Ontology,Ontology-based data integration,Subject-matter expert,Computer science,Web application,Knowledge base,Bioinformatics,Workflow,Database
Conference
Volume
ISSN
ISBN
4075
0302-9743
3-540-36593-1
Citations 
PageRank 
References 
3
0.40
12
Authors
6
Name
Order
Citations
PageRank
Malika Mahoui114120.05
Zina Ben Miled212614.44
Sriram Srinivasan337927.92
Mindi Dippold460.88
Bing Yang530.40
Nianhua Li6606.02